MOMD:
Mouse Oral Microbiome Database
Home
Taxonomy
Genomics
Tools
16S rRNA Gene Idnetification
BLAST Search Genomes
Download
Publication
MOMD Genome Explorer
Selected genome:
Staphylococcus capitis
GW2.1
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
Genome Viewer
PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
Quick search
:
Match all words
Match any words
Match exact phrase
Partially
In whole field
(leave empty to show all)
PROKKA Genome Annotation:
contigs: 35
bases: 2,450,181 bps
CDS: 2,288
rRNA: 10
Repeat region:
tmRNA: 1
tRNA: 63
misc RNA:
Total features: 2,362
Total number of protein coding genes annotated/found:
2,288
Display
20
50
100
All items per page
🡄
Items 21 - 40
🡆
click arrow to navigate by page or
of 115 pages
Molecule ^
PID/GenBank ID *
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5007|JADGMA010000034.1
SEQF5007_00050
Genome Viewer
NA
AA
372/124
24738-24367
hypothetical protein
SEQF5007|JADGMA010000034.1
SEQF5007_00051
Genome Viewer
NA
AA
426/142
25241-24816
Protein hit
SEQF5007|JADGMA010000034.1
SEQF5007_00052
Genome Viewer
NA
AA
741/247
25374-26114
ABC-type transporter ATP-binding protein EcsA
SEQF5007|JADGMA010000034.1
SEQF5007_00053
Genome Viewer
NA
AA
1224/408
26107-27330
hypothetical protein
SEQF5007|JADGMA010000034.1
SEQF5007_00054
Genome Viewer
NA
AA
504/168
27885-27382
Signal transduction protein TRAP
SEQF5007|JADGMA010000034.1
SEQF5007_00055
Genome Viewer
NA
AA
1035/345
28225-29259
Uroporphyrinogen decarboxylase
SEQF5007|JADGMA010000034.1
SEQF5007_00056
Genome Viewer
NA
AA
924/308
29335-30258
Ferrochelatase
SEQF5007|JADGMA010000034.1
SEQF5007_00057
Genome Viewer
NA
AA
1395/465
30400-31794
Protoporphyrinogen oxidase
SEQF5007|JADGMA010000034.1
SEQF5007_00058
Genome Viewer
NA
AA
555/185
31943-32497
Putative hydrolase YdeN
SEQF5007|JADGMA010000034.1
SEQF5007_00067
Genome Viewer
NA
AA
1404/468
34147-35550
2-succinylbenzoate--CoA ligase
SEQF5007|JADGMA010000034.1
SEQF5007_00068
Genome Viewer
NA
AA
1002/334
35547-36548
o-succinylbenzoate synthase
SEQF5007|JADGMA010000034.1
SEQF5007_00069
Genome Viewer
NA
AA
252/84
36796-36545
Putative membrane protein insertion efficiency factor
SEQF5007|JADGMA010000034.1
SEQF5007_00070
Genome Viewer
NA
AA
474/158
36864-37337
Putative 8-oxo-dGTP diphosphatase YtkD
SEQF5007|JADGMA010000034.1
SEQF5007_00071
Genome Viewer
NA
AA
786/262
37318-38103
hypothetical protein
SEQF5007|JADGMA010000034.1
SEQF5007_00072
Genome Viewer
NA
AA
1593/531
39773-38181
Phosphoenolpyruvate carboxykinase (ATP)
SEQF5007|JADGMA010000034.1
SEQF5007_00073
Genome Viewer
NA
AA
1194/398
40149-41342
S-adenosylmethionine synthase
SEQF5007|JADGMA010000034.1
SEQF5007_00074
Genome Viewer
NA
AA
909/303
41453-42361
hypothetical protein
SEQF5007|JADGMA010000034.1
SEQF5007_00075
Genome Viewer
NA
AA
843/281
42514-43356
Glyoxal reductase
SEQF5007|JADGMA010000034.1
SEQF5007_00076
Genome Viewer
NA
AA
357/119
43790-43434
Putative fluoride ion transporter CrcB
SEQF5007|JADGMA010000034.1
SEQF5007_00077
Genome Viewer
NA
AA
363/121
44149-43787
Putative fluoride ion transporter CrcB
🡄
Items 21 - 40
🡆
click arrow to navigate by page or
of 115 pages
Genome Viewer
JBrowse Genome Viewer
* Click GI, UID, Gene Product to go to NCBI record
^ Click column names to toggle sorting
Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
Powered by
